custom made software automapd Search Results


automapper  (ChemAxon LLC)
90
ChemAxon LLC automapper
Automapper, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automapper/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
automapper - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
automap  (SourceForge net)
90
SourceForge net automap
Automap, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automap/product/SourceForge net
Average 90 stars, based on 1 article reviews
automap - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
automapper 5.0.1  (ChemAxon LLC)
90
ChemAxon LLC automapper 5.0.1
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Automapper 5.0.1, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automapper 5.0.1/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
automapper 5.0.1 - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
automapper [20]  (ChemAxon LLC)
90
ChemAxon LLC automapper [20]
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Automapper [20], supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automapper [20]/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
automapper [20] - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
automapper pipeline  (Applied Bioinformatics)
90
Applied Bioinformatics automapper pipeline
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Automapper Pipeline, supplied by Applied Bioinformatics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automapper pipeline/product/Applied Bioinformatics
Average 90 stars, based on 1 article reviews
automapper pipeline - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
automap score threshold  (Abbott Laboratories)
86
Abbott Laboratories automap score threshold
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Automap Score Threshold, supplied by Abbott Laboratories, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automap score threshold/product/Abbott Laboratories
Average 86 stars, based on 1 article reviews
automap score threshold - by Bioz Stars, 2026-05
86/100 stars
  Buy from Supplier
tobii pro lab’s automapping program  (Tobii AB)
90
Tobii AB tobii pro lab’s automapping program
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Tobii Pro Lab’s Automapping Program, supplied by Tobii AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/tobii pro lab’s automapping program/product/Tobii AB
Average 90 stars, based on 1 article reviews
tobii pro lab’s automapping program - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
automapper aam procedure  (ChemAxon LLC)
90
ChemAxon LLC automapper aam procedure
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Automapper Aam Procedure, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automapper aam procedure/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
automapper aam procedure - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
ensite x automap mapping tool  (Abbott Laboratories)
86
Abbott Laboratories ensite x automap mapping tool
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Ensite X Automap Mapping Tool, supplied by Abbott Laboratories, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ensite x automap mapping tool/product/Abbott Laboratories
Average 86 stars, based on 1 article reviews
ensite x automap mapping tool - by Bioz Stars, 2026-05
86/100 stars
  Buy from Supplier
automapper user's guide  (ChemAxon LLC)
90
ChemAxon LLC automapper user's guide
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Automapper User's Guide, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automapper user's guide/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
automapper user's guide - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
automap-technik  (Technik GmbH)
90
Technik GmbH automap-technik
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Automap Technik, supplied by Technik GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automap-technik/product/Technik GmbH
Average 90 stars, based on 1 article reviews
automap-technik - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier
api  (ChemAxon LLC)
90
ChemAxon LLC api
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Api, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/api/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
api - by Bioz Stars, 2026-05
90/100 stars
  Buy from Supplier

Image Search Results


Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and AutoMapper map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input

Journal: Journal of Cheminformatics

Article Title: Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

doi: 10.1186/s13321-017-0223-1

Figure Lengend Snippet: Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and AutoMapper map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input

Article Snippet: Six academic and commercially available atom mapping algorithms were included in our evaluation Reaction Decoder Tool (RDT, [ ]), Determination of Reaction Mechanisms (DREAM, [ ]), AutoMapper 5.0.1 (AutoMapper, [ ], ChemAxon, Budapest, Hungary), Canonical Labeling for Clique Approximation (CLCA, [ ]), Minimum Weighted Edit-Distance (MWED, [ ]) within Pathway Tools, and InfoChem-Map (ICMAP, [ ], InfoChem, Munich, Germany).

Techniques:

Number of evaluated reactions per algorithm

Journal: Journal of Cheminformatics

Article Title: Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

doi: 10.1186/s13321-017-0223-1

Figure Lengend Snippet: Number of evaluated reactions per algorithm

Article Snippet: Six academic and commercially available atom mapping algorithms were included in our evaluation Reaction Decoder Tool (RDT, [ ]), Determination of Reaction Mechanisms (DREAM, [ ]), AutoMapper 5.0.1 (AutoMapper, [ ], ChemAxon, Budapest, Hungary), Canonical Labeling for Clique Approximation (CLCA, [ ]), Minimum Weighted Edit-Distance (MWED, [ ]) within Pathway Tools, and InfoChem-Map (ICMAP, [ ], InfoChem, Munich, Germany).

Techniques:

Comparison of technical features

Journal: Journal of Cheminformatics

Article Title: Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

doi: 10.1186/s13321-017-0223-1

Figure Lengend Snippet: Comparison of technical features

Article Snippet: Six academic and commercially available atom mapping algorithms were included in our evaluation Reaction Decoder Tool (RDT, [ ]), Determination of Reaction Mechanisms (DREAM, [ ]), AutoMapper 5.0.1 (AutoMapper, [ ], ChemAxon, Budapest, Hungary), Canonical Labeling for Clique Approximation (CLCA, [ ]), Minimum Weighted Edit-Distance (MWED, [ ]) within Pathway Tools, and InfoChem-Map (ICMAP, [ ], InfoChem, Munich, Germany).

Techniques: Comparison

Comparison of advanced features

Journal: Journal of Cheminformatics

Article Title: Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

doi: 10.1186/s13321-017-0223-1

Figure Lengend Snippet: Comparison of advanced features

Article Snippet: Six academic and commercially available atom mapping algorithms were included in our evaluation Reaction Decoder Tool (RDT, [ ]), Determination of Reaction Mechanisms (DREAM, [ ]), AutoMapper 5.0.1 (AutoMapper, [ ], ChemAxon, Budapest, Hungary), Canonical Labeling for Clique Approximation (CLCA, [ ]), Minimum Weighted Edit-Distance (MWED, [ ]) within Pathway Tools, and InfoChem-Map (ICMAP, [ ], InfoChem, Munich, Germany).

Techniques: Comparison